MAR 21, 2025 5:00 AM PDT

Function-first single-cell analysis for faster discovery

SPONSORED BY: Lightcast

In the rapidly evolving field of drug discovery, single-cell analysis has become an invaluable tool for understanding cellular heterogeneity and molecular pathways. However, traditional single-cell technologies primarily rely on genomic and transcriptomic data, which only infer cellular function. A function-focused approach offers a transformative shift by enabling the direct measurement of functional outputs early in the discovery process, providing a more comprehensive and actionable understanding of biological processes.

The Limitations of Traditional Single-Cell Analysis

Single-cell sequencing has transformed drug discovery by allowing researchers to study gene expression patterns at an unprecedented level. While these insights are crucial, they often fail to capture dynamic cellular behaviours and real-time functional responses. This is because gene expression alone does not equate to function—many biological processes involve complex interactions beyond transcriptional activity, such as protein modifications, metabolic activity, and intercellular communication.

Traditional single-cell methods require multiple follow-up assays further down the discovery pipeline to validate functional relevance, increasing both the time and cost of drug development. Without direct functional insight early on, identifying high-quality therapeutic candidates becomes more complex, often resulting in a lengthy validation process with higher attrition rates.

Defining a Function-Focused Approach

A function-focused approach is designed to directly assess the biological activity of single cells rather than relying solely on inferred data. This method evaluates real-time cellular responses to different stimuli, measuring functional outputs at the early stages of drug discovery such as biomolecule secretion, antibody blocking, cell-cell interactions and target cell killing.

By capturing these functional readouts down to the single-cell level, researchers can gain a deeper understanding of cellular behaviour and therapeutic potential, reducing the amount of secondary screening and improving decision-making in drug discovery.

Enhancing Drug Discovery

The primary advantage of function-focused single-cell analysis is its ability to streamline the identification of viable therapeutic candidates. Instead of waiting for multiple validation steps, researchers can make informed decisions earlier in the drug development pipeline. This approach offers:

  • Improved decision-making: Directly measuring functional responses eliminates uncertainty associated with inferred gene expression data.
  • Accelerated discovery: Functional screening can be integrated with hit identification, reducing the need for additional assays.
  • Enhanced efficiency: By rejecting non-functional candidates earlier, resources are allocated more effectively, reducing costs and time to market.

Unlocking a new era in single-cell

A function-focused approach represents a paradigm shift in single-cell analysis, moving beyond traditional transcriptomics to directly assess cellular function. By enabling real-time functional insights, this method enhances the precision, efficiency, and speed of drug discovery, ultimately improving the development of targeted therapies. As the industry continues to advance, adopting a function-focused approach will be key to unlocking the full potential of single-cell technology and driving innovation in therapeutic development.

Download our white paper to learn more about how Lightcast can help streamline your single-cell workflows.

 

About the Sponsor
Lightcast is developing a flexible, accessible platform to accelerate single-cell, functional analysis at scale. By consolidating multiple, complex assays into intuitive streamlined workflows we are addressing key limitations in existing methods to provide the freedom to innovate and discover across a broad range of disciplines, from basic and translational research to drug discovery.
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